12/15/2006

生命礼赞—The Inner Life of A Cell

bbs上看到一个链接,点过去,发现是Harvard和一个电脑动画公司联合制作的一个短片,讲述的是血管中白细胞附着在血管壁的过程中,细胞内部各个部分精密工作的过程。

真的很难想象大自然能够进化的如此精妙如此完美,想想这样奇迹般的过程其实是每时每刻发生在我们的身上,不禁被生命的伟大而深深折服!


The Inner Life of A Cell

在线视频:


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另外附上一个解说供参考:

- First shot: circulation. Red blood cells and platelets move extraordinarily fast through the bloodstream while many white blood cells roll along the walls of your blood vessels. This allows the WBCs to respond to signals that it should break through the vessel wall and help out (if it were unattached it wouldn't be able to land in time to be anywhere near where it was needed)

- Next we zoom in on the white blood cell's rolling process. We see that this happens because proteins sticking out from the WBC stick to proteins sticking out from the cells lining the blood vessel (these proteins are called CAMs, or cellular adhesion molecules. I forget exactly what kind of CAM mediates this kind of cell-cell adhesion, but there are subtypes). We also see the extracellular matrix in this shot -- that's the fibrous stuff covering the outside of the cell, giving it rigidity (it's made up of proteins like collagen... inside your body, if it breaks it lets out a signal to nearby cells to grow and fill in the break, if you're cut for example). One thing to note about CAM adhesion is that two proteins don't generally stick together, they have to be specifically tailed for that function.

- Next we zoom in further on the surface of the cell, beyond the extra cellular matrix. We sea the sea of lipids (blue and green round things) that make up the boundary of the cell, and we see a raft floating through them. This is a "lipid raft", and it has more cholesterol in it than the rest of the cellular membrane. These rafts are special places for certain proteins and lipids to aggregate (i.e., some proteins designed to accept signals from the environment will aggregate in these -- an example of a signal is a hormone like insulin, which when it attaches to a protein designed to catch it will cause a cell to change metabolism, for example).

- Next we see two proteins making contact (the red one hanging down and the purple one sticking up). I don't know what these proteins are, but my guess is that the vessel cell is signaling to the WBC that the WBC should invade the tissue (i.e., there's damage and the inflammatory process sends signals that eventually get to WBCs, which then come to help).

- A pretty shot zoomed out of a raft floating along the cell surface

- I don't know what the trinagular structres are, which is frustrating. Maybe it's actin covering the interior wall of the cell? Actin is a cytoskeletal protein (i.e., it makes up a rigid structural and transport network) that covers the interior side of the cellular membrane. It's a meeting point between things on the inside of the cell and the cellular membrane (which is useful, for example, if a signal is received on the cell surface and needs to trickle into intracellular components).

- Next is the purple and green lattice. I think this is actin with cross-linking proteins. Actin fibers (actin is made up of protein subunits that form those long, twisty fibers) don't just randomly stack, they're also connected to each other by proteins to make the dense structure you see here.

- Next we see actin polymerization (the purple fibrils self-assembling). This is a spontaneous process that happens when the concentrations of actin are high enough (and it looks really cool here). The cell tightly regulates the concentration of actin so as to make the right amount of these fibers.

- Next we see the small green protein stick to actin, breaking it up. Our cells will activate these proteins if they want to break down that huge actin lattice we saw earlier very quickly (i.e., when the cell is moving). An interesting sidenote is how well the proteins fit together. This isn't artistic license, these proteins' 3D structures are modeled after real life.

- Next the huge green tube -- this is a microtubule assembling. Like actin, this is a spontaneous process dictated by concentration. Microtubules are made up of alternating alpha and beta subunits. Then we see the microtubule dissassembling. Notice how it frays at the end and then completely falls apart...I think that's a realistic rendering.

- Next is what I think is the coolest part, the little walker along the microtubule. That's a kinesin, a protein that literally walks along microtubules to carry cargo around the cell. This is how things end up at their destinations without having to just float around until they hit the right thing. Microtubules are organized to radiated from a microtubule organizing center out to the cell surface. Here a kinesin is walking in a specific direction (I assume toward the cell surface) because its cargo, a huge vesicle, needs to get there. Vesicles are little lipid-bound blobs that carry stuff around -- so this all is the FedEx of the cell. Kinesins are fascinating proteins -- they don't walk without energy input, since the walking requires work. ATP is involved.

- Then we zoom out and see the MTOC (microtubule organizing center) in the background (the sphere with two orthogonal cylinders in front). Microtubules emanate from there. MTOCs are pretty interesting things because they have to multiply and divide with the rest of the cell, and we don't know exactly how that works yet.

- Now we've changed venues...we see a round surface with little holes. That round surface is the nucleus, where DNA lives. Those holes are nuclear pores, which is how things get in and out of the nucleus. DNA is transcribed into RNA in the nucleus, and that RNA is then transported out of the cell where it is translated into proteins by ribosomes. In higher order organisms the RNA makes a circle as you see here. If you look closely you can see the small subunit of the ribosome attach to the RNA and scan along until it finds the start sequence on the RNA, where the large subunit then attaches.

- Then we zoom in on the ribosome reading the RNA and spitting out the growing protein. Pretty cool shot.

- Next is the blue and red proteins floating over to the huge cylindrical blob. I don't know if that's a proteasome or a chaperone...I think it's a chaperone. Anyway, the role of a chaperone is to take in a newly synthesized protein and fold it properly. There's lots of research going on into how exactly this happens right now (i.e., Fold@Home).

- The next shot is translation again (see the yellow-green ribosome and the RNA stuck in it). This time translation is happening into the Endoplasmic Reticulum, however, because the protein it's making needs to be secreted out of the cell. This is where that process starts (proteins meant for secretion aren't just made in the cytosol and then magically end up on the outside of the cell. They're spit into this special compartment where its exit from the cell is ordered).

- Next is some vesicle formation, I assume off of the ER and toward the golgi apparatus, which is the next stop in the secretory pathway for proteins destined for the outside of the cell. We see the kinesin in the foreground again.

- Next we see the vesicle arriving at the golgi apparatus, the large layer of blobby pancakes. Vesicles from the ER arrive at one end and progress through the layers, where they're either targeted for other parts of the cell, or if not will exit via a vesicle to the cell membrane.

- Now we see a huge cavity opening up and things flying out of the cell. This is what happens when a vesicle makes it to the cell membrane -- it fuses, releasing its contents outside. Proteins that were in the vesicle membrane are now part of the cellular membrane. The orientation of these membrane-attached proteins is controlled so that they face the right way.

- Then we see raft formation, I think, around a set of proteins.

- Then we zoom out and see the result of the signal to the WBC -- it invades through the blood vessel wall to the surrounding tissue. I don't know anything about the immune system, though, so my details on the macro aspect are sketchy and possibly incorrect.

12/14/2006

荣升版主

经过两天的申请,今天终于被批准为瀚海星云AI版的版主了!

本来在AI版上发的帖子就不多,这个多亏有那么多朋友的支持才得以上任,嗯,要谢谢大家了!

这么长时间来,对人工智能也不断有新的认识。这确实是一个很庞大的领域,也很新颖。虽然人工智能的发展远远不像人们当初想象的那样顺利,但是AI的确是一个具有很大理论价值和应用前景的学科。虽然还不能做出多大的贡献,但是能够从事AI方面的研究,我还是感觉很幸运的。 

嗯,今后多多关注AI版,好好经营发展好这个版,不能辜负大家的信任!

12/11/2006

[Z]十二星座等级最终划分

转载文章,绝无考证,仅供YY!如有雷同,未必巧合!hoho~~

三等星座

  双鱼座:12星座中一个比较脆弱的星座,没主见,任人摆布,意志力较差,容易堕落,没出息,同时据调查此星座犯罪率居然是12星座之首!幸亏双鱼座多半是有天蝎座罩着,要不然鱼鱼如何立足还真是麻烦呢。

三等星座

  双子座:此星座虽然口才超好,但却有哗众取宠之嫌,而且俗话说言多必失,做事三心两意,喜新厌旧,缺乏定力,易受诱惑,毅力较差,游戏人生,综合实力实在不高,可以说是双鱼座的难兄难弟了。

三等星座

  处女座:一生都在追求完美的星座,但没发现最不完美的却是自己。经不起挫折,容易一撅不振,臭屁之王,神经质,斤斤计较,洁癖,不合群。有时候有点招人讨厌的星座.

三等星座

  射手座:性格活泼开朗堪称12星座之最,朋友众多,喜欢自由自在不受拘束的生活,不过此星星没啥耐心,意志力很差,往往做事半途而废。此外又花心,做事不太踏实,有时也不够忠实。

--------------------------------------------



二等星座

  巨蟹座:此星座适合照顾人,细心体贴,是慈父贤母,但不适合做大事,毅力不强,综合实力并没高出三等星座很多。

  代表性大神:无

二等星座

  白羊座:性格豪爽,光明磊落,勇敢,忠贞,极具阳刚,缺点是做事易冲动,不动脑子,天真,好斗,不过女性会比男性好一些。

  代表性大神:伊斯兰教主神真主安拉[生日4月20日] 战神阿瑞斯

二等星座

  金牛座:稳重、踏实,有艺术细胞,为人较诚实,属实干家,只要踏踏实实也能有一翻成就,不过此星座多为守财奴很吝啬,一生为金钱奔波劳碌。

  代表性大神:佛教主神释珈摩尼[生日阴历四月初八] 希腊主神宙斯

二等星座

  天秤座:优雅,有风度,仪表堂堂,人缘极好,朋友众多,是12星座中最吃的开的星座。不过此星座一般贪图享受。

  代表性大神:太阳神阿波罗

二等星座

  狮子座:有领导才能,有魄力,敢作敢当,做男人很好,缺点是骄傲自大,听不进好言相劝,多是表面的王者。

  代表性大神:海神波塞东
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一等星座

  星座等级排名第三名:

  水瓶座:思维怪异,非常人能及,异常冷静,行为古怪独特,捉摸不定。意志也比较顽强,是成大事者的好选择,一个极其有魅力的外星人星座。

  代表性大神:中国道教的玉皇大帝[生日阴历正月初九]


一等星座

  星座等级排名第二名:

  摩羯座:吃苦耐劳,大器晚成,有野心,忍辱负重,坚韧不拔,意志顽强,大智若愚,是成大事者另一选择,综合实力略仅次于第一名的优等星座!

  代表性大神:基督教主神耶和华[基督教生日 12月25日]


一等星座

  星座等级排名第一名:

  天蝎座:深谋远虑,深藏不露,城府极深,有魄力,有野心,勇敢,意志力超强,隐忍执着,洞察力极强,爆发力强,有12星座独一无二的第六感,是成大事者的首选,实数12星座之冠!

  代表性大神:印度主神创造神大梵天[印度教生日11月9日] 冥王哈迪斯


 

12/10/2006

1210流水帐

好久没有更新了,一直没有什么好写的。这两天实验室又举办会议,跑来跑去的,不过也算是饱餐了几顿,今天也终于结束了。回到宿舍一个人都没有,正好好休息一下,坐下就不想动,累死了。


这几天也没有干啥事了,休息一下再继续吧。发现需要做的事情还非常多,不过现在开始有了眉目了,应该再接再厉吧。不说了,趴着睡会,^_^